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Ohne ihre Zustimmung werden wir ihre Daten niemals an Dritte weitergeben. E-Mail- und Datenverkehr im Internet ist niemals 100 %ig sicher.
Data protection:
As a website operator, we take the protection of your personal data very serious. All personal data will be handled confidently and in accordance with the legal regulations. The request of your email address is used for communication and provision of the software. You can at any time object to your consent to the storage of your personal data for the aforementioned purposes. A formless application by mail is sufficient.
Without your consent, we will never disclose your data to third parties. E-mail and data traffic on the internet is never 100% secure.
We developed a software tool enabling user-friendly and standardized pre- and post-processing of images of rooted soil by combining image processing techniques such as image registration, calibration, and segmentation in a graphical user interface. The added benefits of this image processing approach include an improved workflow in soil zymography. For evaluation, we conducted a rhizobox experiment with maize and determined the activity of leucine-aminopeptidase before and after glucose addition based on soil zymography. The temporal and spatial distribution of enzyme activity at the root-soil interface can be visualized by Root-o-Mat which offers 1) standardized image pre-processing, 2) calibration, 3) identification of hotspots of various intensity thresholds, 4) spatial analysis for selected roots, 5) inter-active illustration of enzyme activity profile lines, 6) image viewer, and 7) detection of temporal changes of enzyme activity. Registering images of the same rhizobox taken in successive periods allows further temporal and spatial analysis. We conclude that Root-o-Mat simplifies and firmly anchors image processing and image analyses in soil zymography.
HINT: You will be able to scroll the images by clicking on the arrows below or by dragging the images. You can also click on an image which will open a gallery with more images.
HINT: An email containing the download link will be send to you automatically after you will enter your email address and clicking on the download button.
User manual for Root-O-Mat. Click Here
Here you will find a short presentation of Root-O-Mat. Click Here
The source code will be available via git repository soon.
HINT: By clicking on the CONTACT button, you can send us a message via contact form.
If you find any bug or just have an awesome idea that we could consider to implement in our next release, do not hesitate to contact us.
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